Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 KRT8P4-201ENST00000509735 1454 ntBASIC11.51□□□□□ -0.57
TRBV12-3P01733 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 OR2I1P-210ENST00000642037 4691 ntBASIC11.51□□□□□ -0.57
TRBV12-3P01733 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 RN7SKP175-201ENST00000408472 289 ntBASIC11.51□□□□□ -0.57
TRBV12-3P01733 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 CD8B2-202ENST00000417670 633 ntBASIC11.51□□□□□ -0.57
TRBV12-3P01733 TLE1P1-201ENST00000422965 589 ntBASIC11.51□□□□□ -0.57
TRBV12-3P01733 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 AP005482.1-201ENST00000563722 1273 ntBASIC11.51□□□□□ -0.57
TRBV12-3P01733 RN7SL713P-201ENST00000582127 302 ntBASIC11.51□□□□□ -0.57
TRBV12-3P01733 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 AP000593.2-201ENST00000542775 1433 ntBASIC11.51□□□□□ -0.57
TRBV12-3P01733 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC11.5□□□□□ -0.57
TRBV12-3P01733 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.5□□□□□ -0.57
TRBV12-3P01733 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
TRBV12-3P01733 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.5□□□□□ -0.57
TRBV12-3P01733 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
TRBV12-3P01733 AC232323.1-201ENST00000540724 2099 ntBASIC11.5□□□□□ -0.57
TRBV12-3P01733 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.5□□□□□ -0.57
TRBV12-3P01733 AL136379.1-201ENST00000623471 2642 ntBASIC11.5□□□□□ -0.57
TRBV12-3P01733 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC11.5□□□□□ -0.57
TRBV12-3P01733 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC11.5□□□□□ -0.57
TRBV12-3P01733 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 TPO-206ENST00000382269 1155 ntTSL 5 BASIC11.5□□□□□ -0.57
TRBV12-3P01733 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
TRBV12-3P01733 SERF2-209ENST00000409646 559 ntTSL 4 BASIC11.5□□□□□ -0.57
TRBV12-3P01733 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC11.5□□□□□ -0.57
TRBV12-3P01733 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 AC004945.1-201ENST00000416738 983 ntBASIC11.5□□□□□ -0.57
TRBV12-3P01733 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC11.5□□□□□ -0.57
TRBV12-3P01733 OLR1-203ENST00000432556 950 ntTSL 2 BASIC11.5□□□□□ -0.57
TRBV12-3P01733 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC11.5□□□□□ -0.57
TRBV12-3P01733 AC131206.1-201ENST00000538078 1211 ntBASIC11.5□□□□□ -0.57
TRBV12-3P01733 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC11.5□□□□□ -0.57
TRBV12-3P01733 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TRBV12-3P01733 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.5□□□□□ -0.57
TRBV12-3P01733 PPY2P-201ENST00000582808 702 ntBASIC11.5□□□□□ -0.57
TRBV12-3P01733 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms