Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 CELP-201ENST00000411440 1249 ntTSL 5 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 ETV2-207ENST00000619399 994 ntTSL 5 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LOC102724428A0A0B4J2F2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 CROCCP1-201ENST00000426910 5675 ntBASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC021305.1-201ENST00000520656 1514 ntBASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 ACE3P-201ENST00000423435 1973 ntBASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 PPIA-208ENST00000489459 907 ntTSL 2 BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 PPIA-210ENST00000620047 827 ntTSL 5 BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC18.54■□□□□ 0.56
LOC102724428A0A0B4J2F2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 PYY2-201ENST00000315776 282 ntBASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 RGS5-216ENST00000449680 788 ntTSL 3 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC012073.1-201ENST00000606114 1108 ntBASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC090386.2-201ENST00000623010 1039 ntBASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 DOC2GP-204ENST00000639052 2548 ntBASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC18.53■□□□□ 0.56
LOC102724428A0A0B4J2F2 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms