Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 AL122018.1-201ENST00000446607 2310 ntBASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 MEX3B-202ENST00000558133 4333 ntBASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.24□□□□□ -0.45
RCL1Q9Y2P8 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 AL121723.1-201ENST00000445194 1519 ntBASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 KRT8P12-202ENST00000472924 1397 ntBASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 KRT18P43-201ENST00000469825 1281 ntBASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 AC074044.1-201ENST00000609673 707 ntBASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 AC026120.1-201ENST00000611536 926 ntBASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.23□□□□□ -0.45
RCL1Q9Y2P8 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RCL1Q9Y2P8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RCL1Q9Y2P8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
RCL1Q9Y2P8 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RCL1Q9Y2P8 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.22□□□□□ -0.45
RCL1Q9Y2P8 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.22□□□□□ -0.45
RCL1Q9Y2P8 AC111170.3-201ENST00000624282 2464 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms