Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 RN7SKP214-201ENST00000364208 315 ntBASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 AL662890.1-201ENST00000396818 632 ntBASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 MEG3_2.1-201ENST00000611456 105 ntBASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 AC004923.1-202ENST00000642106 209 ntBASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 AC005740.2-201ENST00000511085 419 ntBASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 AL133499.1-201ENST00000596207 608 ntBASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 AL805961.1-203ENST00000641078 1258 ntBASIC13.11□□□□□ -0.31
KIAA1549Q9HCM3 TMBIM7P-202ENST00000641474 1516 ntBASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 RN7SL832P-201ENST00000607781 1756 ntBASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 KRT8P29-201ENST00000420409 1371 ntBASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 AC106872.11-201ENST00000605838 421 ntBASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.1□□□□□ -0.31
KIAA1549Q9HCM3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms