Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 C2orf69P1-201ENST00000563532 1093 ntBASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 DBP-202ENST00000593500 712 ntTSL 2 BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
RTFDC1Q9BY42 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC17.77■□□□□ 0.43
RTFDC1Q9BY42 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTFDC1Q9BY42 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.77■□□□□ 0.43
RTFDC1Q9BY42 AL136172.1-201ENST00000598590 1394 ntBASIC17.77■□□□□ 0.43
RTFDC1Q9BY42 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RTFDC1Q9BY42 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RTFDC1Q9BY42 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.77■□□□□ 0.43
RTFDC1Q9BY42 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.77■□□□□ 0.43
RTFDC1Q9BY42 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.77■□□□□ 0.43
RTFDC1Q9BY42 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.77■□□□□ 0.43
RTFDC1Q9BY42 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RTFDC1Q9BY42 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RTFDC1Q9BY42 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.77■□□□□ 0.43
RTFDC1Q9BY42 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.77■□□□□ 0.43
RTFDC1Q9BY42 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
RTFDC1Q9BY42 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTFDC1Q9BY42 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 AP002353.1-201ENST00000528257 1599 ntBASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 AC234644.1-201ENST00000406065 370 ntBASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 AC004837.1-201ENST00000446267 564 ntBASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 REEP5-205ENST00000504247 480 ntTSL 5 BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 MIR5196-201ENST00000578146 115 ntBASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 AC011270.2-201ENST00000624293 2550 ntBASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RTFDC1Q9BY42 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 AC010234.1-201ENST00000494599 870 ntBASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 AL022344.2-201ENST00000568976 968 ntBASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 AC007952.4-201ENST00000573866 637 ntBASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 FO393412.1-201ENST00000619841 382 ntBASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 AC013268.4-201ENST00000637413 2228 ntBASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.75■□□□□ 0.43
RTFDC1Q9BY42 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms