Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.32■□□□□ 0.04
CSPG4P5Q96PW8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSPG4P5Q96PW8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CSPG4P5Q96PW8 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CSPG4P5Q96PW8 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CSPG4P5Q96PW8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 AP000812.2-201ENST00000538934 718 ntBASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 AC103988.2-201ENST00000561804 725 ntBASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 AC073413.1-201ENST00000603927 732 ntBASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 AL354989.2-201ENST00000435838 1540 ntBASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 PDIA3P1-201ENST00000471856 1510 ntBASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 AC139712.1-201ENST00000378256 1875 ntBASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 OR2I1P-210ENST00000642037 4691 ntBASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 AC027601.5-201ENST00000624065 2482 ntBASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSPG4P5Q96PW8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 PUDPP3-201ENST00000445368 636 ntBASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 HSPA7-201ENST00000445535 1927 ntBASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 COX5BP1-201ENST00000507622 393 ntBASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 AC106886.1-201ENST00000568660 600 ntBASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 MIR4683-201ENST00000579659 81 ntBASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 RN7SL713P-201ENST00000582127 302 ntBASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 AC006504.5-208ENST00000588784 2401 ntBASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 AC117489.1-201ENST00000625169 3217 ntBASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.3■□□□□ 0.04
CSPG4P5Q96PW8 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CSPG4P5Q96PW8 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms