Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM11Q96F44 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM11Q96F44 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRIM11Q96F44 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM11Q96F44 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM11Q96F44 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRIM11Q96F44 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
TRIM11Q96F44 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
TRIM11Q96F44 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRIM11Q96F44 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.75■□□□□ 0.11
TRIM11Q96F44 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.75■□□□□ 0.11
TRIM11Q96F44 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM11Q96F44 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.75■□□□□ 0.11
TRIM11Q96F44 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM11Q96F44 AC004466.1-201ENST00000599515 1080 ntBASIC15.75■□□□□ 0.11
TRIM11Q96F44 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.75■□□□□ 0.11
TRIM11Q96F44 ENPP7P14-201ENST00000621765 1040 ntBASIC15.75■□□□□ 0.11
TRIM11Q96F44 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
TRIM11Q96F44 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM11Q96F44 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM11Q96F44 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.75■□□□□ 0.11
TRIM11Q96F44 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM11Q96F44 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
TRIM11Q96F44 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM11Q96F44 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 AC134312.5-201ENST00000568031 1313 ntBASIC15.74■□□□□ 0.11
TRIM11Q96F44 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 AC090505.1-201ENST00000430515 1834 ntBASIC15.74■□□□□ 0.11
TRIM11Q96F44 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 RN7SKP230-201ENST00000365642 335 ntBASIC15.74■□□□□ 0.11
TRIM11Q96F44 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 AC145423.3-201ENST00000615987 467 ntBASIC15.74■□□□□ 0.11
TRIM11Q96F44 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM11Q96F44 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM11Q96F44 AC011840.2-201ENST00000563063 1520 ntBASIC15.73■□□□□ 0.11
TRIM11Q96F44 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM11Q96F44 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms