Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 AC134915.1-201ENST00000426461 574 ntBASIC16.84■□□□□ 0.29
SMARCE1Q969G3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 SPDYE22P-201ENST00000582158 798 ntBASIC16.84■□□□□ 0.29
SMARCE1Q969G3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
SMARCE1Q969G3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SMARCE1Q969G3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMARCE1Q969G3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
SMARCE1Q969G3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMARCE1Q969G3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMARCE1Q969G3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 GNAQP1-201ENST00000444815 1067 ntBASIC16.83■□□□□ 0.28
SMARCE1Q969G3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 AC093214.1-201ENST00000511688 1107 ntBASIC16.83■□□□□ 0.28
SMARCE1Q969G3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCE1Q969G3 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 AC092135.3-201ENST00000624151 1846 ntBASIC16.82■□□□□ 0.28
SMARCE1Q969G3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 C1QBPP1-201ENST00000400117 770 ntBASIC16.82■□□□□ 0.28
SMARCE1Q969G3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.82■□□□□ 0.28
SMARCE1Q969G3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms