Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 AC005229.1-201ENST00000392885 409 ntBASIC14.59□□□□□ -0.07
ATL1Q8WXF7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 FO681548.1-201ENST00000455617 1132 ntBASIC14.59□□□□□ -0.07
ATL1Q8WXF7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 RN7SL837P-201ENST00000463010 287 ntBASIC14.59□□□□□ -0.07
ATL1Q8WXF7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 ENPP7P14-201ENST00000621765 1040 ntBASIC14.59□□□□□ -0.07
ATL1Q8WXF7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 LINC00552-201ENST00000625151 2579 ntBASIC14.59□□□□□ -0.07
ATL1Q8WXF7 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ATL1Q8WXF7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATL1Q8WXF7 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATL1Q8WXF7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATL1Q8WXF7 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATL1Q8WXF7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
ATL1Q8WXF7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATL1Q8WXF7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
ATL1Q8WXF7 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 AC140479.7-201ENST00000636301 2332 ntBASIC14.58□□□□□ -0.08
ATL1Q8WXF7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 AL596325.1-201ENST00000563991 1082 ntBASIC14.58□□□□□ -0.08
ATL1Q8WXF7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 RPSAP52-203ENST00000622976 1023 ntBASIC14.58□□□□□ -0.08
ATL1Q8WXF7 AC132938.4-201ENST00000623835 848 ntBASIC14.58□□□□□ -0.08
ATL1Q8WXF7 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 MSTO2P-201ENST00000314835 1709 ntBASIC14.58□□□□□ -0.08
ATL1Q8WXF7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
ATL1Q8WXF7 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms