Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 AC007326.2-201ENST00000624224 7579 ntBASIC15.23■□□□□ 0.03
PTCD2Q8WV60 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 AL137784.3-201ENST00000623858 2288 ntBASIC15.23■□□□□ 0.03
PTCD2Q8WV60 OR2I1P-209ENST00000641730 5365 ntBASIC15.23■□□□□ 0.03
PTCD2Q8WV60 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 AC005912.2-201ENST00000619492 2400 ntBASIC15.23■□□□□ 0.03
PTCD2Q8WV60 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTCD2Q8WV60 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 AC093534.1-201ENST00000504977 132 ntBASIC15.22■□□□□ 0.03
PTCD2Q8WV60 AC022616.1-201ENST00000518688 554 ntBASIC15.22■□□□□ 0.03
PTCD2Q8WV60 AP003041.2-201ENST00000525666 1180 ntBASIC15.22■□□□□ 0.03
PTCD2Q8WV60 AC020656.1-201ENST00000548900 599 ntTSL 3 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 AC104072.1-201ENST00000568817 668 ntBASIC15.22■□□□□ 0.03
PTCD2Q8WV60 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 AL023583.1-201ENST00000607518 1143 ntBASIC15.22■□□□□ 0.03
PTCD2Q8WV60 AC017083.2-201ENST00000608069 979 ntBASIC15.22■□□□□ 0.03
PTCD2Q8WV60 AC023510.2-201ENST00000622162 746 ntBASIC15.22■□□□□ 0.03
PTCD2Q8WV60 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 AC023908.3-201ENST00000564211 3047 ntBASIC15.22■□□□□ 0.03
PTCD2Q8WV60 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTCD2Q8WV60 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 AC134312.5-201ENST00000568031 1313 ntBASIC15.21■□□□□ 0.03
PTCD2Q8WV60 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 BAATP1-201ENST00000412284 1225 ntBASIC15.21■□□□□ 0.03
PTCD2Q8WV60 AC019070.1-201ENST00000415008 1024 ntBASIC15.21■□□□□ 0.03
PTCD2Q8WV60 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 MTND1P26-201ENST00000440488 538 ntBASIC15.21■□□□□ 0.03
PTCD2Q8WV60 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 AL157385.1-201ENST00000446973 268 ntBASIC15.21■□□□□ 0.03
PTCD2Q8WV60 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms