Protein–RNA interactions for Protein: Q8TCX1

DYNC2LI1, Cytoplasmic dynein 2 light intermediate chain 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DYNC2LI1Q8TCX1 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
DYNC2LI1Q8TCX1 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
DYNC2LI1Q8TCX1 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 KRT18P64-201ENST00000434946 1219 ntBASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 RARRES2P8-201ENST00000566335 367 ntBASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 AC092364.2-202ENST00000597012 1073 ntBASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 IFNL4P1-201ENST00000607083 540 ntBASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 AC009474.1-201ENST00000455096 1565 ntBASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 AC138969.2-201ENST00000532739 9932 ntBASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 PCDHA6-201ENST00000378126 3267 ntBASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.14□□□□□ -0.31
DYNC2LI1Q8TCX1 TUBB8P4-201ENST00000511806 1324 ntBASIC13.13□□□□□ -0.31
DYNC2LI1Q8TCX1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DYNC2LI1Q8TCX1 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
DYNC2LI1Q8TCX1 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DYNC2LI1Q8TCX1 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DYNC2LI1Q8TCX1 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.13□□□□□ -0.31
DYNC2LI1Q8TCX1 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DYNC2LI1Q8TCX1 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DYNC2LI1Q8TCX1 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
DYNC2LI1Q8TCX1 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
DYNC2LI1Q8TCX1 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DYNC2LI1Q8TCX1 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DYNC2LI1Q8TCX1 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms