Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 AP000354.1-201ENST00000396982 456 ntBASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 RN7SL523P-201ENST00000484401 298 ntBASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 MIR2278-201ENST00000516344 96 ntBASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 MIR6893-201ENST00000613458 69 ntBASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 AC023024.2-201ENST00000623561 1993 ntBASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 AC008026.2-201ENST00000495438 348 ntBASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 AC254633.1-201ENST00000606790 345 ntBASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 AC007952.5-201ENST00000572818 1486 ntBASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 AC022080.1-201ENST00000366255 781 ntBASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 CDK4P1-201ENST00000454213 828 ntBASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 MAX-218ENST00000557746 571 ntTSL 4 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 AL021707.6-201ENST00000609212 491 ntBASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 BID-213ENST00000615414 2236 ntTSL 5 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC9.65□□□□□ -0.86
ALMS1Q8TCU4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 KRT8P34-201ENST00000577607 1044 ntBASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
ALMS1Q8TCU4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 PSAT1P2-201ENST00000426107 972 ntBASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 AL136084.1-201ENST00000449172 318 ntBASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 RN7SL128P-201ENST00000467883 305 ntBASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 AC090820.1-201ENST00000519722 591 ntBASIC9.64□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms