Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 BNIP3P42-201ENST00000454982 569 ntBASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 FO681548.1-201ENST00000455617 1132 ntBASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 AL590640.2-201ENST00000457038 527 ntBASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 AC078819.1-201ENST00000547454 765 ntBASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 AC012085.1-201ENST00000548270 765 ntBASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 AC079316.1-201ENST00000548397 411 ntBASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 BNIP3P29-201ENST00000598302 571 ntBASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 AC011447.5-201ENST00000616168 564 ntBASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMARCC2Q8TAQ2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 TPM3P8-201ENST00000330554 643 ntBASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 POM121L8P-201ENST00000417732 1281 ntBASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 POM121L9P-203ENST00000441984 1285 ntBASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 CSF2RBP1-201ENST00000447905 391 ntBASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 RNA5SP486-201ENST00000515961 83 ntBASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 RN7SL48P-201ENST00000579283 293 ntBASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCC2Q8TAQ2 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.39■□□□□ 0.38
SMARCC2Q8TAQ2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SMARCC2Q8TAQ2 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.39■□□□□ 0.38
SMARCC2Q8TAQ2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 AC026954.1-201ENST00000429771 1293 ntBASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 MESTP3-201ENST00000503460 968 ntBASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 ECM1P1-201ENST00000604092 1279 ntBASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCC2Q8TAQ2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms