Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.12■□□□□ 0.17
KLHDC9Q8NEP7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.12■□□□□ 0.17
KLHDC9Q8NEP7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 GCSHP3-201ENST00000431120 391 ntBASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 PSMD4P1-201ENST00000433951 1109 ntBASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 RPL35P9-201ENST00000446059 350 ntBASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 RN7SL396P-201ENST00000471086 295 ntBASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 RN7SL665P-201ENST00000578793 300 ntBASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 AC140113.1-201ENST00000603467 169 ntBASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KLHDC9Q8NEP7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 ACE3P-201ENST00000423435 1973 ntBASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 AC024293.1-201ENST00000467930 498 ntBASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 AC244250.3-201ENST00000620749 366 ntBASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 AC002472.4-201ENST00000641915 272 ntBASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 BRD7P5-201ENST00000299197 1822 ntBASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KLHDC9Q8NEP7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 AC006372.4-201ENST00000624122 1543 ntBASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms