Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 DGCR9-201ENST00000609630 2415 ntBASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 TTTY23B-201ENST00000442790 549 ntBASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 AC022494.1-201ENST00000466044 728 ntBASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 AC022616.1-201ENST00000518688 554 ntBASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 AC009486.1-201ENST00000569860 813 ntBASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 GNRHR2-203ENST00000581100 1187 ntBASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 OR2I1P-209ENST00000641730 5365 ntBASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 MYO15B-237ENST00000642007 4893 ntBASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 AC140479.7-201ENST00000636301 2332 ntBASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 CICP17-201ENST00000418553 2377 ntBASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 BCRP2-202ENST00000447763 634 ntBASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 GPR53P-205ENST00000457298 1084 ntBASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 AC011495.1-201ENST00000498085 584 ntBASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 BCRP6-201ENST00000510112 632 ntBASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 BCRP7-201ENST00000511549 544 ntBASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 SLC25A47P1-201ENST00000531577 414 ntBASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 PTP4A1P2-201ENST00000546033 454 ntBASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 AL138709.1-201ENST00000614840 1693 ntBASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SIMC1Q8NDZ2 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms