Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.28■□□□□ 0.04
SIX5Q8N196 IGHV3-37-201ENST00000518544 340 ntBASIC15.28■□□□□ 0.04
SIX5Q8N196 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC15.28■□□□□ 0.04
SIX5Q8N196 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.28■□□□□ 0.04
SIX5Q8N196 AC141586.1-203ENST00000567242 366 ntBASIC15.28■□□□□ 0.04
SIX5Q8N196 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.28■□□□□ 0.04
SIX5Q8N196 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SIX5Q8N196 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SIX5Q8N196 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
SIX5Q8N196 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.28■□□□□ 0.04
SIX5Q8N196 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 AC244394.1-201ENST00000435000 1665 ntBASIC15.28■□□□□ 0.04
SIX5Q8N196 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.28■□□□□ 0.04
SIX5Q8N196 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.27■□□□□ 0.04
SIX5Q8N196 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIX5Q8N196 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIX5Q8N196 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIX5Q8N196 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SIX5Q8N196 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SIX5Q8N196 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
SIX5Q8N196 FAM90A7P-201ENST00000382628 1395 ntBASIC15.27■□□□□ 0.04
SIX5Q8N196 FAM90A23P-201ENST00000400136 1395 ntBASIC15.27■□□□□ 0.04
SIX5Q8N196 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SIX5Q8N196 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIX5Q8N196 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SIX5Q8N196 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SIX5Q8N196 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIX5Q8N196 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIX5Q8N196 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIX5Q8N196 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
SIX5Q8N196 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SIX5Q8N196 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIX5Q8N196 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SIX5Q8N196 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.27■□□□□ 0.04
SIX5Q8N196 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.27■□□□□ 0.04
SIX5Q8N196 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIX5Q8N196 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SIX5Q8N196 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SIX5Q8N196 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SIX5Q8N196 AC026320.2-201ENST00000434379 478 ntBASIC15.27■□□□□ 0.04
SIX5Q8N196 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.27■□□□□ 0.04
SIX5Q8N196 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.27■□□□□ 0.04
SIX5Q8N196 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SIX5Q8N196 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SIX5Q8N196 AP003680.1-201ENST00000598970 3660 ntBASIC15.27■□□□□ 0.03
SIX5Q8N196 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SIX5Q8N196 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SIX5Q8N196 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SIX5Q8N196 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SIX5Q8N196 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SIX5Q8N196 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SIX5Q8N196 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SIX5Q8N196 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SIX5Q8N196 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SIX5Q8N196 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.27■□□□□ 0.03
SIX5Q8N196 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SIX5Q8N196 AC020910.5-201ENST00000623668 1865 ntBASIC15.27■□□□□ 0.03
SIX5Q8N196 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SIX5Q8N196 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SIX5Q8N196 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SIX5Q8N196 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.27■□□□□ 0.03
SIX5Q8N196 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SIX5Q8N196 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SIX5Q8N196 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SIX5Q8N196 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SIX5Q8N196 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.26■□□□□ 0.03
SIX5Q8N196 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.26■□□□□ 0.03
SIX5Q8N196 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SIX5Q8N196 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.26■□□□□ 0.03
SIX5Q8N196 PPOX-204ENST00000462866 473 ntTSL 5 BASIC15.26■□□□□ 0.03
SIX5Q8N196 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.26■□□□□ 0.03
SIX5Q8N196 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.26■□□□□ 0.03
SIX5Q8N196 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SIX5Q8N196 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SIX5Q8N196 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.26■□□□□ 0.03
SIX5Q8N196 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms