Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 AC026320.2-201ENST00000434379 478 ntBASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 AC008723.1-201ENST00000506922 207 ntBASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 MIR3677-201ENST00000578964 60 ntBASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 AC087045.2-201ENST00000606279 1003 ntBASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 MIR6769A-201ENST00000617340 73 ntBASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 YRDCP1-201ENST00000621419 643 ntBASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 AC073347.1-201ENST00000421633 2643 ntBASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 MROH4P-201ENST00000431302 1578 ntBASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 RBM8B-201ENST00000555532 525 ntBASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 RN7SL602P-201ENST00000578326 324 ntBASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 AC138894.2-201ENST00000602838 371 ntBASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 AC074138.1-201ENST00000611182 1303 ntBASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS3Q8IXF0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.29■□□□□ 0.04
NPAS3Q8IXF0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.29■□□□□ 0.04
NPAS3Q8IXF0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.29■□□□□ 0.04
NPAS3Q8IXF0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS3Q8IXF0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS3Q8IXF0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS3Q8IXF0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS3Q8IXF0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS3Q8IXF0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS3Q8IXF0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS3Q8IXF0 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS3Q8IXF0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS3Q8IXF0 LINC01165-201ENST00000445190 1623 ntBASIC15.29■□□□□ 0.04
NPAS3Q8IXF0 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPAS3Q8IXF0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms