Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC104982.3-201ENST00000581995 514 ntBASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 AC013726.1-201ENST00000563747 2285 ntBASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRTM4Q86VH4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LRRTM4Q86VH4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRRTM4Q86VH4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRRTM4Q86VH4 LINC02228-204ENST00000642115 2962 ntBASIC14.58□□□□□ -0.07
LRRTM4Q86VH4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LRRTM4Q86VH4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRRTM4Q86VH4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
LRRTM4Q86VH4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRRTM4Q86VH4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LRRTM4Q86VH4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 POM121L10P-201ENST00000436994 1285 ntBASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms