Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 C1QBPP1-201ENST00000400117 770 ntBASIC15.26■□□□□ 0.03
CASC4Q6P4E1 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 INGX-202ENST00000489074 768 ntBASIC15.26■□□□□ 0.03
CASC4Q6P4E1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 AC055876.2-201ENST00000531834 546 ntBASIC15.26■□□□□ 0.03
CASC4Q6P4E1 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 SPDYE22P-201ENST00000582158 798 ntBASIC15.26■□□□□ 0.03
CASC4Q6P4E1 BRI3BPP1-201ENST00000594224 787 ntBASIC15.26■□□□□ 0.03
CASC4Q6P4E1 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASC4Q6P4E1 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 RNA5SP421-201ENST00000516864 134 ntBASIC15.25■□□□□ 0.03
CASC4Q6P4E1 RFPL4AP1-201ENST00000530883 850 ntBASIC15.25■□□□□ 0.03
CASC4Q6P4E1 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.25■□□□□ 0.03
CASC4Q6P4E1 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms