Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH6P55285 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.52■□□□□ 0.07
CDH6P55285 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDH6P55285 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH6P55285 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CDH6P55285 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDH6P55285 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.52■□□□□ 0.07
CDH6P55285 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.52■□□□□ 0.07
CDH6P55285 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.52■□□□□ 0.07
CDH6P55285 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDH6P55285 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH6P55285 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CDH6P55285 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH6P55285 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH6P55285 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CDH6P55285 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH6P55285 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 AL138725.1-201ENST00000407347 1314 ntBASIC15.51■□□□□ 0.07
CDH6P55285 CLUHP2-201ENST00000426660 1303 ntBASIC15.51■□□□□ 0.07
CDH6P55285 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH6P55285 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH6P55285 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.51■□□□□ 0.07
CDH6P55285 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH6P55285 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.51■□□□□ 0.07
CDH6P55285 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH6P55285 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH6P55285 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH6P55285 COX20P2-201ENST00000452636 358 ntBASIC15.51■□□□□ 0.07
CDH6P55285 AC007389.4-201ENST00000454674 793 ntBASIC15.51■□□□□ 0.07
CDH6P55285 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH6P55285 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH6P55285 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH6P55285 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH6P55285 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDH6P55285 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDH6P55285 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CDH6P55285 ENPP7P14-201ENST00000621765 1040 ntBASIC15.51■□□□□ 0.07
CDH6P55285 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDH6P55285 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH6P55285 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CDH6P55285 AL138709.1-201ENST00000614840 1693 ntBASIC15.51■□□□□ 0.07
CDH6P55285 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CDH6P55285 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH6P55285 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH6P55285 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH6P55285 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH6P55285 AL136172.1-201ENST00000598590 1394 ntBASIC15.5■□□□□ 0.07
CDH6P55285 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH6P55285 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH6P55285 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH6P55285 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH6P55285 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH6P55285 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH6P55285 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH6P55285 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH6P55285 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH6P55285 AL035633.1-201ENST00000406139 838 ntBASIC15.5■□□□□ 0.07
CDH6P55285 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH6P55285 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.5■□□□□ 0.07
CDH6P55285 POM121L8P-201ENST00000417732 1281 ntBASIC15.5■□□□□ 0.07
CDH6P55285 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH6P55285 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH6P55285 POM121L9P-203ENST00000441984 1285 ntBASIC15.5■□□□□ 0.07
CDH6P55285 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH6P55285 AL355864.2-201ENST00000447420 863 ntBASIC15.5■□□□□ 0.07
CDH6P55285 AP001889.1-201ENST00000525414 633 ntBASIC15.5■□□□□ 0.07
CDH6P55285 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CDH6P55285 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.5■□□□□ 0.07
CDH6P55285 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH6P55285 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH6P55285 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH6P55285 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH6P55285 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH6P55285 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH6P55285 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH6P55285 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH6P55285 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH6P55285 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms