Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
PSMD4P55036 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PSMD4P55036 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PSMD4P55036 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PSMD4P55036 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PSMD4P55036 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
PSMD4P55036 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.92□□□□□ -0.18
PSMD4P55036 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.92□□□□□ -0.18
PSMD4P55036 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
PSMD4P55036 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.92□□□□□ -0.18
PSMD4P55036 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.92□□□□□ -0.18
PSMD4P55036 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.92□□□□□ -0.18
PSMD4P55036 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.92□□□□□ -0.18
PSMD4P55036 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.92□□□□□ -0.18
PSMD4P55036 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.92□□□□□ -0.18
PSMD4P55036 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.92□□□□□ -0.18
PSMD4P55036 TLE1P1-201ENST00000422965 589 ntBASIC13.92□□□□□ -0.18
PSMD4P55036 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PSMD4P55036 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.92□□□□□ -0.18
PSMD4P55036 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.92□□□□□ -0.18
PSMD4P55036 EIF3FP3-201ENST00000434851 1086 ntBASIC13.92□□□□□ -0.18
PSMD4P55036 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.92□□□□□ -0.18
PSMD4P55036 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.92□□□□□ -0.18
PSMD4P55036 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PSMD4P55036 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.92□□□□□ -0.18
PSMD4P55036 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.92□□□□□ -0.18
PSMD4P55036 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.92□□□□□ -0.18
PSMD4P55036 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PSMD4P55036 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PSMD4P55036 AC145423.3-201ENST00000615987 467 ntBASIC13.92□□□□□ -0.18
PSMD4P55036 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.92□□□□□ -0.18
PSMD4P55036 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.92□□□□□ -0.18
PSMD4P55036 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PSMD4P55036 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PSMD4P55036 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.92□□□□□ -0.18
PSMD4P55036 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PSMD4P55036 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PSMD4P55036 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PSMD4P55036 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.91□□□□□ -0.18
PSMD4P55036 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.91□□□□□ -0.18
PSMD4P55036 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PSMD4P55036 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
PSMD4P55036 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
PSMD4P55036 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.91□□□□□ -0.18
PSMD4P55036 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.91□□□□□ -0.18
PSMD4P55036 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.91□□□□□ -0.18
PSMD4P55036 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
PSMD4P55036 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.91□□□□□ -0.18
PSMD4P55036 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.91□□□□□ -0.18
PSMD4P55036 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
PSMD4P55036 AC245100.3-201ENST00000441281 285 ntBASIC13.91□□□□□ -0.18
PSMD4P55036 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.91□□□□□ -0.18
PSMD4P55036 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.91□□□□□ -0.18
PSMD4P55036 AP001889.1-201ENST00000525414 633 ntBASIC13.91□□□□□ -0.18
PSMD4P55036 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
PSMD4P55036 SLC25A47P1-201ENST00000531577 414 ntBASIC13.91□□□□□ -0.18
PSMD4P55036 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.91□□□□□ -0.18
PSMD4P55036 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PSMD4P55036 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PSMD4P55036 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.91□□□□□ -0.18
PSMD4P55036 LINC02084-201ENST00000606069 1096 ntBASIC13.91□□□□□ -0.18
PSMD4P55036 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.91□□□□□ -0.18
PSMD4P55036 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
PSMD4P55036 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.91□□□□□ -0.18
PSMD4P55036 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms