Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-1P43699 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.26□□□□□ -0.45
NKX2-1P43699 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
NKX2-1P43699 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
NKX2-1P43699 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
NKX2-1P43699 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.26□□□□□ -0.45
NKX2-1P43699 AL592309.1-201ENST00000443127 649 ntBASIC12.26□□□□□ -0.45
NKX2-1P43699 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.26□□□□□ -0.45
NKX2-1P43699 AC004066.1-201ENST00000502488 802 ntBASIC12.26□□□□□ -0.45
NKX2-1P43699 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.26□□□□□ -0.45
NKX2-1P43699 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.26□□□□□ -0.45
NKX2-1P43699 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-1P43699 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-1P43699 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 AC040169.1-201ENST00000565382 521 ntBASIC12.26□□□□□ -0.45
NKX2-1P43699 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-1P43699 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-1P43699 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.26□□□□□ -0.45
NKX2-1P43699 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.26□□□□□ -0.45
NKX2-1P43699 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 AC018529.1-201ENST00000613063 361 ntBASIC12.26□□□□□ -0.45
NKX2-1P43699 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.26□□□□□ -0.45
NKX2-1P43699 MIR6069-201ENST00000620069 79 ntBASIC12.26□□□□□ -0.45
NKX2-1P43699 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
NKX2-1P43699 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.26□□□□□ -0.45
NKX2-1P43699 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-1P43699 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-1P43699 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-1P43699 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-1P43699 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-1P43699 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
NKX2-1P43699 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-1P43699 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX2-1P43699 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
NKX2-1P43699 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-1P43699 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.26□□□□□ -0.45
NKX2-1P43699 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX2-1P43699 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-1P43699 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-1P43699 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.25□□□□□ -0.45
NKX2-1P43699 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
NKX2-1P43699 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
NKX2-1P43699 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
NKX2-1P43699 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX2-1P43699 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
NKX2-1P43699 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX2-1P43699 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX2-1P43699 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-1P43699 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX2-1P43699 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-1P43699 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
NKX2-1P43699 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-1P43699 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
NKX2-1P43699 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX2-1P43699 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
NKX2-1P43699 AC012617.1-204ENST00000586340 2305 ntBASIC12.25□□□□□ -0.45
NKX2-1P43699 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX2-1P43699 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-1P43699 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
NKX2-1P43699 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX2-1P43699 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.25□□□□□ -0.45
NKX2-1P43699 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
NKX2-1P43699 AL022342.1-201ENST00000400363 863 ntBASIC12.25□□□□□ -0.45
NKX2-1P43699 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
NKX2-1P43699 AC069335.1-201ENST00000489972 472 ntBASIC12.25□□□□□ -0.45
NKX2-1P43699 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX2-1P43699 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.25□□□□□ -0.45
NKX2-1P43699 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.25□□□□□ -0.45
NKX2-1P43699 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.25□□□□□ -0.45
NKX2-1P43699 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX2-1P43699 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.25□□□□□ -0.45
NKX2-1P43699 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
NKX2-1P43699 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX2-1P43699 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-1P43699 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX2-1P43699 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
NKX2-1P43699 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-1P43699 AC020910.6-201ENST00000623084 1459 ntBASIC12.25□□□□□ -0.45
NKX2-1P43699 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-1P43699 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX2-1P43699 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
NKX2-1P43699 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX2-1P43699 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
NKX2-1P43699 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms