Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.11■□□□□ 0.01
RPA3P35244 AC023310.3-201ENST00000557027 670 ntBASIC15.11■□□□□ 0.01
RPA3P35244 AC100756.1-201ENST00000562736 682 ntBASIC15.11■□□□□ 0.01
RPA3P35244 AC138749.3-201ENST00000567691 622 ntBASIC15.11■□□□□ 0.01
RPA3P35244 AC036164.1-201ENST00000570544 333 ntBASIC15.11■□□□□ 0.01
RPA3P35244 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPA3P35244 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.11■□□□□ 0.01
RPA3P35244 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.11■□□□□ 0.01
RPA3P35244 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.11■□□□□ 0.01
RPA3P35244 AC116165.1-201ENST00000611806 668 ntBASIC15.11■□□□□ 0.01
RPA3P35244 AL158212.4-201ENST00000624062 1286 ntBASIC15.11■□□□□ 0.01
RPA3P35244 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.11■□□□□ 0.01
RPA3P35244 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RPA3P35244 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RPA3P35244 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPA3P35244 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RPA3P35244 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPA3P35244 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPA3P35244 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPA3P35244 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPA3P35244 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPA3P35244 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPA3P35244 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPA3P35244 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.11■□□□□ 0.01
RPA3P35244 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
RPA3P35244 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPA3P35244 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPA3P35244 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPA3P35244 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.11■□□□□ 0.01
RPA3P35244 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPA3P35244 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPA3P35244 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.11■□□□□ 0.01
RPA3P35244 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPA3P35244 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
RPA3P35244 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RPA3P35244 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.1■□□□□ 0.01
RPA3P35244 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.1■□□□□ 0.01
RPA3P35244 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.1■□□□□ 0.01
RPA3P35244 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RPA3P35244 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.1■□□□□ 0.01
RPA3P35244 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RPA3P35244 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.1■□□□□ 0.01
RPA3P35244 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.1■□□□□ 0.01
RPA3P35244 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.1■□□□□ 0.01
RPA3P35244 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.1■□□□□ 0.01
RPA3P35244 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.1■□□□□ 0.01
RPA3P35244 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.1■□□□□ 0.01
RPA3P35244 RARRES2P5-201ENST00000564013 466 ntBASIC15.1■□□□□ 0.01
RPA3P35244 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.1■□□□□ 0.01
RPA3P35244 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.1■□□□□ 0.01
RPA3P35244 AC004790.1-201ENST00000612686 536 ntBASIC15.1■□□□□ 0.01
RPA3P35244 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.1■□□□□ 0.01
RPA3P35244 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.1■□□□□ 0.01
RPA3P35244 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.1■□□□□ 0.01
RPA3P35244 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.1■□□□□ 0.01
RPA3P35244 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RPA3P35244 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.1■□□□□ 0.01
RPA3P35244 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RPA3P35244 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
RPA3P35244 INE2-201ENST00000630399 1874 ntBASIC15.1■□□□□ 0.01
RPA3P35244 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RPA3P35244 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
RPA3P35244 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 AC099521.3-201ENST00000624251 2938 ntBASIC15.1■□□□□ 0.01
RPA3P35244 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.1■□□□□ 0.01
RPA3P35244 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPA3P35244 DGCR9-201ENST00000609630 2415 ntBASIC15.09■□□□□ 0.01
RPA3P35244 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPA3P35244 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RPA3P35244 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPA3P35244 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RPA3P35244 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPA3P35244 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RPA3P35244 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPA3P35244 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.09■□□□□ 0.01
RPA3P35244 AC007541.1-201ENST00000570282 1469 ntBASIC15.09■□□□□ 0.01
RPA3P35244 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPA3P35244 CICP16-201ENST00000502609 2813 ntBASIC15.09■□□□□ 0.01
RPA3P35244 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RPA3P35244 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPA3P35244 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms