Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
MMP11P24347 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 RPSAP36-202ENST00000494591 1261 ntBASIC14.16□□□□□ -0.14
MMP11P24347 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
MMP11P24347 AP006547.1-201ENST00000563435 692 ntBASIC14.16□□□□□ -0.14
MMP11P24347 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
MMP11P24347 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.16□□□□□ -0.14
MMP11P24347 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.16□□□□□ -0.14
MMP11P24347 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.16□□□□□ -0.14
MMP11P24347 AL118558.3-201ENST00000607414 1079 ntBASIC14.16□□□□□ -0.14
MMP11P24347 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.16□□□□□ -0.14
MMP11P24347 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.16□□□□□ -0.14
MMP11P24347 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.16□□□□□ -0.14
MMP11P24347 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
MMP11P24347 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
MMP11P24347 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
MMP11P24347 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 OR2I1P-210ENST00000642037 4691 ntBASIC14.16□□□□□ -0.14
MMP11P24347 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 AC126755.1-201ENST00000525846 6405 ntBASIC14.16□□□□□ -0.14
MMP11P24347 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
MMP11P24347 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.15□□□□□ -0.14
MMP11P24347 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.15□□□□□ -0.14
MMP11P24347 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
MMP11P24347 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.15□□□□□ -0.14
MMP11P24347 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
MMP11P24347 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.15□□□□□ -0.14
MMP11P24347 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
MMP11P24347 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.15□□□□□ -0.14
MMP11P24347 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
MMP11P24347 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
MMP11P24347 MIR1247-201ENST00000408206 136 ntBASIC14.15□□□□□ -0.14
MMP11P24347 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.15□□□□□ -0.14
MMP11P24347 GPAA1P2-201ENST00000417923 928 ntBASIC14.15□□□□□ -0.14
MMP11P24347 AC079178.1-201ENST00000420915 656 ntBASIC14.15□□□□□ -0.14
MMP11P24347 AC104306.2-201ENST00000451877 341 ntBASIC14.15□□□□□ -0.14
MMP11P24347 KRT8P13-201ENST00000463294 1010 ntBASIC14.15□□□□□ -0.14
MMP11P24347 AC099548.2-209ENST00000480264 625 ntBASIC14.15□□□□□ -0.14
MMP11P24347 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.15□□□□□ -0.14
MMP11P24347 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.15□□□□□ -0.14
MMP11P24347 RN7SL713P-201ENST00000582127 302 ntBASIC14.15□□□□□ -0.14
MMP11P24347 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
MMP11P24347 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
MMP11P24347 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
MMP11P24347 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
MMP11P24347 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.15□□□□□ -0.14
MMP11P24347 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 GRK6P1-201ENST00000400595 1711 ntBASIC14.15□□□□□ -0.14
MMP11P24347 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MMP11P24347 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
MMP11P24347 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MMP11P24347 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.14□□□□□ -0.15
MMP11P24347 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MMP11P24347 INTS4P1-203ENST00000641008 3683 ntBASIC14.14□□□□□ -0.15
MMP11P24347 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MMP11P24347 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.14□□□□□ -0.15
MMP11P24347 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
MMP11P24347 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
MMP11P24347 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
MMP11P24347 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MMP11P24347 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
MMP11P24347 AC012508.2-201ENST00000567613 1472 ntBASIC14.14□□□□□ -0.15
MMP11P24347 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MMP11P24347 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MMP11P24347 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
MMP11P24347 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
MMP11P24347 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms