Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
CFTRP13569 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC24.55■■□□□ 1.52
CFTRP13569 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
CFTRP13569 AC092903.1-201ENST00000466506 262 ntBASIC24.55■■□□□ 1.52
CFTRP13569 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC24.55■■□□□ 1.52
CFTRP13569 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CFTRP13569 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC24.55■■□□□ 1.52
CFTRP13569 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC24.55■■□□□ 1.52
CFTRP13569 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC24.55■■□□□ 1.52
CFTRP13569 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC24.55■■□□□ 1.52
CFTRP13569 ESR1-214ENST00000638569 132 ntTSL 5 BASIC24.55■■□□□ 1.52
CFTRP13569 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC24.55■■□□□ 1.52
CFTRP13569 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CFTRP13569 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CFTRP13569 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
CFTRP13569 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CFTRP13569 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CFTRP13569 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CFTRP13569 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
CFTRP13569 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CFTRP13569 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CFTRP13569 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CFTRP13569 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
CFTRP13569 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
CFTRP13569 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
CFTRP13569 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CFTRP13569 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CFTRP13569 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CFTRP13569 SNORA57-201ENST00000383870 149 ntBASIC24.54■■□□□ 1.52
CFTRP13569 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC24.54■■□□□ 1.52
CFTRP13569 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC24.54■■□□□ 1.52
CFTRP13569 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC24.54■■□□□ 1.52
CFTRP13569 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC24.54■■□□□ 1.52
CFTRP13569 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC24.54■■□□□ 1.52
CFTRP13569 LINC00115-201ENST00000473798 1317 ntBASIC24.54■■□□□ 1.52
CFTRP13569 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC24.54■■□□□ 1.52
CFTRP13569 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CFTRP13569 AC020763.4-201ENST00000623414 4170 ntBASIC24.54■■□□□ 1.52
CFTRP13569 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CFTRP13569 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CFTRP13569 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CFTRP13569 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC24.54■■□□□ 1.52
CFTRP13569 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CFTRP13569 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC24.54■■□□□ 1.52
CFTRP13569 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CFTRP13569 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CFTRP13569 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CFTRP13569 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CFTRP13569 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CFTRP13569 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC24.53■■□□□ 1.52
CFTRP13569 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CFTRP13569 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CFTRP13569 AC008536.3-201ENST00000623282 1599 ntBASIC24.53■■□□□ 1.52
CFTRP13569 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
CFTRP13569 AMT-256ENST00000638063 1783 ntTSL 5 BASIC24.53■■□□□ 1.52
CFTRP13569 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CFTRP13569 NHP2P1-201ENST00000335274 462 ntBASIC24.53■■□□□ 1.52
CFTRP13569 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC24.53■■□□□ 1.52
CFTRP13569 AC093300.1-201ENST00000510368 1201 ntBASIC24.53■■□□□ 1.52
CFTRP13569 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC24.53■■□□□ 1.52
CFTRP13569 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC24.53■■□□□ 1.52
CFTRP13569 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CFTRP13569 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC24.53■■□□□ 1.52
CFTRP13569 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC24.53■■□□□ 1.52
CFTRP13569 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC24.53■■□□□ 1.52
CFTRP13569 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC24.53■■□□□ 1.52
CFTRP13569 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC24.53■■□□□ 1.52
CFTRP13569 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CFTRP13569 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CFTRP13569 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
CFTRP13569 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CFTRP13569 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC24.53■■□□□ 1.52
CFTRP13569 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
CFTRP13569 WASH7P-201ENST00000488147 1351 ntBASIC24.53■■□□□ 1.52
CFTRP13569 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
CFTRP13569 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CFTRP13569 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC24.53■■□□□ 1.52
CFTRP13569 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CFTRP13569 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
CFTRP13569 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
CFTRP13569 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
CFTRP13569 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CFTRP13569 IFNWP2-201ENST00000431203 580 ntBASIC24.52■■□□□ 1.52
CFTRP13569 GOLGA6L16P-201ENST00000441780 1299 ntBASIC24.52■■□□□ 1.52
CFTRP13569 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
CFTRP13569 SLC25A15P3-201ENST00000505530 290 ntBASIC24.52■■□□□ 1.52
CFTRP13569 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC24.52■■□□□ 1.52
CFTRP13569 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
CFTRP13569 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
CFTRP13569 GGNBP1-204ENST00000613113 887 ntBASIC24.52■■□□□ 1.52
CFTRP13569 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC24.52■■□□□ 1.52
CFTRP13569 CR392039.1-201ENST00000623217 204 ntBASIC24.52■■□□□ 1.52
CFTRP13569 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CFTRP13569 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC24.52■■□□□ 1.52
CFTRP13569 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
CFTRP13569 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CFTRP13569 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
CFTRP13569 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CFTRP13569 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CFTRP13569 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms