Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.59■□□□□ 0.25
CYP3A4P08684 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.59■□□□□ 0.25
CYP3A4P08684 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CYP3A4P08684 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.59■□□□□ 0.25
CYP3A4P08684 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CYP3A4P08684 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.59■□□□□ 0.25
CYP3A4P08684 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.59■□□□□ 0.25
CYP3A4P08684 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.59■□□□□ 0.25
CYP3A4P08684 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.59■□□□□ 0.25
CYP3A4P08684 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.59■□□□□ 0.25
CYP3A4P08684 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.59■□□□□ 0.25
CYP3A4P08684 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.59■□□□□ 0.25
CYP3A4P08684 AC022217.1-201ENST00000521069 738 ntBASIC16.59■□□□□ 0.25
CYP3A4P08684 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.59■□□□□ 0.25
CYP3A4P08684 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.59■□□□□ 0.25
CYP3A4P08684 AC009779.1-201ENST00000551138 283 ntBASIC16.59■□□□□ 0.25
CYP3A4P08684 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.59■□□□□ 0.25
CYP3A4P08684 SORD2P-201ENST00000558556 1069 ntBASIC16.59■□□□□ 0.25
CYP3A4P08684 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 AL645939.5-201ENST00000606834 243 ntBASIC16.59■□□□□ 0.25
CYP3A4P08684 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.59■□□□□ 0.25
CYP3A4P08684 AC138649.2-201ENST00000615886 705 ntBASIC16.59■□□□□ 0.25
CYP3A4P08684 AC133540.1-201ENST00000620845 1019 ntBASIC16.59■□□□□ 0.25
CYP3A4P08684 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CYP3A4P08684 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.59■□□□□ 0.25
CYP3A4P08684 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.59■□□□□ 0.25
CYP3A4P08684 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CYP3A4P08684 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CYP3A4P08684 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.59■□□□□ 0.25
CYP3A4P08684 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.58■□□□□ 0.25
CYP3A4P08684 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.58■□□□□ 0.25
CYP3A4P08684 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CYP3A4P08684 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CYP3A4P08684 AC140479.7-201ENST00000636301 2332 ntBASIC16.58■□□□□ 0.25
CYP3A4P08684 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CYP3A4P08684 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.58■□□□□ 0.25
CYP3A4P08684 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CYP3A4P08684 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CYP3A4P08684 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CYP3A4P08684 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CYP3A4P08684 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CYP3A4P08684 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CYP3A4P08684 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CYP3A4P08684 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CYP3A4P08684 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CYP3A4P08684 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.58■□□□□ 0.24
CYP3A4P08684 ST13P19-201ENST00000442505 1124 ntBASIC16.58■□□□□ 0.24
CYP3A4P08684 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.58■□□□□ 0.24
CYP3A4P08684 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.58■□□□□ 0.24
CYP3A4P08684 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.58■□□□□ 0.24
CYP3A4P08684 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.58■□□□□ 0.24
CYP3A4P08684 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.58■□□□□ 0.24
CYP3A4P08684 TUBBP5-203ENST00000508529 1334 ntBASIC16.58■□□□□ 0.24
CYP3A4P08684 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CYP3A4P08684 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CYP3A4P08684 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CYP3A4P08684 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CYP3A4P08684 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CYP3A4P08684 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CYP3A4P08684 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CYP3A4P08684 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CYP3A4P08684 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CYP3A4P08684 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CYP3A4P08684 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CYP3A4P08684 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.58■□□□□ 0.24
CYP3A4P08684 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CYP3A4P08684 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CYP3A4P08684 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
CYP3A4P08684 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.58■□□□□ 0.24
CYP3A4P08684 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
CYP3A4P08684 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
CYP3A4P08684 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CYP3A4P08684 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CYP3A4P08684 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CYP3A4P08684 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CYP3A4P08684 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.57■□□□□ 0.24
CYP3A4P08684 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CYP3A4P08684 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CYP3A4P08684 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CYP3A4P08684 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms