Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 CICP23-201ENST00000605013 2741 ntBASIC15.01□□□□□ -0.01
RETP07949 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.01□□□□□ -0.01
RETP07949 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.01□□□□□ -0.01
RETP07949 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.01□□□□□ -0.01
RETP07949 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RETP07949 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 AC091951.1-201ENST00000512854 2465 ntBASIC15.01□□□□□ -0.01
RETP07949 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
RETP07949 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RETP07949 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
RETP07949 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.01□□□□□ -0.01
RETP07949 GHSR-202ENST00000427970 912 ntBASIC15.01□□□□□ -0.01
RETP07949 EIF3FP3-201ENST00000434851 1086 ntBASIC15.01□□□□□ -0.01
RETP07949 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.01□□□□□ -0.01
RETP07949 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.01□□□□□ -0.01
RETP07949 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.01□□□□□ -0.01
RETP07949 MIR4754-201ENST00000582477 89 ntBASIC15.01□□□□□ -0.01
RETP07949 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.01□□□□□ -0.01
RETP07949 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
RETP07949 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.01□□□□□ -0.01
RETP07949 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.01□□□□□ -0.01
RETP07949 AL162426.1-201ENST00000624141 743 ntBASIC15.01□□□□□ -0.01
RETP07949 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.01□□□□□ -0.01
RETP07949 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.01□□□□□ -0.01
RETP07949 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.01□□□□□ -0.01
RETP07949 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RETP07949 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RETP07949 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RETP07949 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.01□□□□□ -0.01
RETP07949 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RETP07949 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RETP07949 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RETP07949 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RETP07949 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15□□□□□ -0.01
RETP07949 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15□□□□□ -0.01
RETP07949 AC013726.1-201ENST00000563747 2285 ntBASIC15□□□□□ -0.01
RETP07949 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RETP07949 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15□□□□□ -0.01
RETP07949 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15□□□□□ -0.01
RETP07949 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
RETP07949 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15□□□□□ -0.01
RETP07949 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RETP07949 AC106881.1-201ENST00000605849 3329 ntBASIC15□□□□□ -0.01
RETP07949 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RETP07949 AC007787.1-201ENST00000588095 1583 ntBASIC15□□□□□ -0.01
RETP07949 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15□□□□□ -0.01
RETP07949 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
RETP07949 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15□□□□□ -0.01
RETP07949 MIR1227-201ENST00000408484 88 ntBASIC15□□□□□ -0.01
RETP07949 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15□□□□□ -0.01
RETP07949 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15□□□□□ -0.01
RETP07949 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15□□□□□ -0.01
RETP07949 CTBP2P4-201ENST00000513884 920 ntBASIC15□□□□□ -0.01
RETP07949 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15□□□□□ -0.01
RETP07949 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15□□□□□ -0.01
RETP07949 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15□□□□□ -0.01
RETP07949 AC100827.2-201ENST00000563214 1194 ntBASIC15□□□□□ -0.01
RETP07949 AC005357.2-202ENST00000590507 1060 ntBASIC15□□□□□ -0.01
RETP07949 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RETP07949 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15□□□□□ -0.01
RETP07949 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15□□□□□ -0.01
RETP07949 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15□□□□□ -0.01
RETP07949 AC051619.9-201ENST00000623237 597 ntBASIC15□□□□□ -0.01
RETP07949 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RETP07949 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15□□□□□ -0.01
RETP07949 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RETP07949 AC025271.4-201ENST00000621477 1726 ntBASIC15□□□□□ -0.01
RETP07949 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RETP07949 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15□□□□□ -0.01
RETP07949 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
RETP07949 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RETP07949 TBC1D3J-201ENST00000620719 1426 ntBASIC15□□□□□ -0.01
RETP07949 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RETP07949 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
RETP07949 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RETP07949 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15□□□□□ -0.01
RETP07949 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15□□□□□ -0.01
RETP07949 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RETP07949 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RETP07949 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
RETP07949 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms