Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.08■□□□□ 0
HLA-DQB2P05538 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
HLA-DQB2P05538 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DQB2P05538 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DQB2P05538 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HLA-DQB2P05538 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.07■□□□□ 0
HLA-DQB2P05538 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HLA-DQB2P05538 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 AC005089.1-201ENST00000619486 2241 ntBASIC15.07■□□□□ 0
HLA-DQB2P05538 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DQB2P05538 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HLA-DQB2P05538 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HLA-DQB2P05538 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.07■□□□□ 0
HLA-DQB2P05538 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.07■□□□□ 0
HLA-DQB2P05538 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.07■□□□□ 0
HLA-DQB2P05538 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 GPR53P-205ENST00000457298 1084 ntBASIC15.07■□□□□ 0
HLA-DQB2P05538 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.07■□□□□ 0
HLA-DQB2P05538 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.07■□□□□ 0
HLA-DQB2P05538 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.07■□□□□ 0
HLA-DQB2P05538 AC104989.1-201ENST00000519711 778 ntBASIC15.07■□□□□ 0
HLA-DQB2P05538 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.07■□□□□ 0
HLA-DQB2P05538 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.07■□□□□ 0
HLA-DQB2P05538 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DQB2P05538 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HLA-DQB2P05538 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
HLA-DQB2P05538 KRT8P4-201ENST00000509735 1454 ntBASIC15.07■□□□□ 0
HLA-DQB2P05538 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DQB2P05538 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
HLA-DQB2P05538 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DQB2P05538 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.07■□□□□ 0
HLA-DQB2P05538 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.06■□□□□ 0
HLA-DQB2P05538 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 AC015688.4-201ENST00000580780 1647 ntBASIC15.06■□□□□ 0
HLA-DQB2P05538 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 SNX18-202ENST00000343017 3140 ntBASIC15.06■□□□□ 0
HLA-DQB2P05538 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 CNN2P10-201ENST00000443067 918 ntBASIC15.06■□□□□ 0
HLA-DQB2P05538 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.06■□□□□ 0
HLA-DQB2P05538 AC119751.2-201ENST00000504529 210 ntBASIC15.06■□□□□ 0
HLA-DQB2P05538 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.06■□□□□ 0
HLA-DQB2P05538 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.06■□□□□ 0
HLA-DQB2P05538 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 AP006547.1-201ENST00000563435 692 ntBASIC15.06■□□□□ 0
HLA-DQB2P05538 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.06■□□□□ 0
HLA-DQB2P05538 PPY2P-201ENST00000582808 702 ntBASIC15.06■□□□□ 0
HLA-DQB2P05538 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.06■□□□□ 0
HLA-DQB2P05538 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.06■□□□□ 0
HLA-DQB2P05538 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.06■□□□□ 0
HLA-DQB2P05538 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.06■□□□□ 0
HLA-DQB2P05538 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
HLA-DQB2P05538 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.06■□□□□ 0
HLA-DQB2P05538 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.06■□□□□ 0
HLA-DQB2P05538 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DQB2P05538 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HLA-DQB2P05538 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HLA-DQB2P05538 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.05■□□□□ 0
HLA-DQB2P05538 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.05■□□□□ 0
HLA-DQB2P05538 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HLA-DQB2P05538 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
HLA-DQB2P05538 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HLA-DQB2P05538 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.05■□□□□ 0
HLA-DQB2P05538 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
HLA-DQB2P05538 AC006504.5-208ENST00000588784 2401 ntBASIC15.05■□□□□ 0
HLA-DQB2P05538 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms