Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
GAPDHP04406 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
GAPDHP04406 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAPDHP04406 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GAPDHP04406 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
GAPDHP04406 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GAPDHP04406 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
GAPDHP04406 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
GAPDHP04406 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAPDHP04406 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAPDHP04406 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAPDHP04406 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAPDHP04406 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAPDHP04406 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.54□□□□□ -0.4
GAPDHP04406 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GAPDHP04406 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAPDHP04406 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.54□□□□□ -0.4
GAPDHP04406 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
GAPDHP04406 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.53□□□□□ -0.4
GAPDHP04406 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
GAPDHP04406 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.53□□□□□ -0.4
GAPDHP04406 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.53□□□□□ -0.4
GAPDHP04406 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.53□□□□□ -0.4
GAPDHP04406 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
GAPDHP04406 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 AC015909.5-201ENST00000624336 2266 ntBASIC12.53□□□□□ -0.4
GAPDHP04406 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
GAPDHP04406 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
GAPDHP04406 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
GAPDHP04406 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.53□□□□□ -0.4
GAPDHP04406 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.53□□□□□ -0.4
GAPDHP04406 SPTLC1P1-201ENST00000447199 261 ntBASIC12.53□□□□□ -0.4
GAPDHP04406 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 TMEM198B-204ENST00000484016 896 ntBASIC12.53□□□□□ -0.4
GAPDHP04406 AC004066.1-201ENST00000502488 802 ntBASIC12.53□□□□□ -0.4
GAPDHP04406 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.53□□□□□ -0.4
GAPDHP04406 SERBP1P5-201ENST00000510079 1181 ntBASIC12.53□□□□□ -0.4
GAPDHP04406 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.53□□□□□ -0.4
GAPDHP04406 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.53□□□□□ -0.4
GAPDHP04406 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.53□□□□□ -0.4
GAPDHP04406 LINC02560-201ENST00000596379 459 ntBASIC12.53□□□□□ -0.4
GAPDHP04406 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.53□□□□□ -0.4
GAPDHP04406 AC099568.2-201ENST00000609194 695 ntBASIC12.53□□□□□ -0.4
GAPDHP04406 AL391069.4-201ENST00000609583 481 ntBASIC12.53□□□□□ -0.4
GAPDHP04406 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
GAPDHP04406 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.53□□□□□ -0.4
GAPDHP04406 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.53□□□□□ -0.4
GAPDHP04406 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
GAPDHP04406 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
GAPDHP04406 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.53□□□□□ -0.4
GAPDHP04406 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 SLC7A15P-201ENST00000424028 1363 ntBASIC12.53□□□□□ -0.4
GAPDHP04406 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.53□□□□□ -0.4
GAPDHP04406 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
GAPDHP04406 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.53□□□□□ -0.4
GAPDHP04406 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.53□□□□□ -0.4
GAPDHP04406 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
GAPDHP04406 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
GAPDHP04406 AC007541.1-201ENST00000570282 1469 ntBASIC12.53□□□□□ -0.4
GAPDHP04406 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.53□□□□□ -0.4
GAPDHP04406 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAPDHP04406 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
GAPDHP04406 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.4
GAPDHP04406 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms