Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.43□□□□□ -0.26
SPTA1P02549 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC13.43□□□□□ -0.26
SPTA1P02549 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC13.43□□□□□ -0.26
SPTA1P02549 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SPTA1P02549 AL138725.1-201ENST00000407347 1314 ntBASIC13.43□□□□□ -0.26
SPTA1P02549 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.43□□□□□ -0.26
SPTA1P02549 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SPTA1P02549 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.43□□□□□ -0.26
SPTA1P02549 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
SPTA1P02549 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SPTA1P02549 TLE1P1-201ENST00000422965 589 ntBASIC13.43□□□□□ -0.26
SPTA1P02549 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.43□□□□□ -0.26
SPTA1P02549 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC13.43□□□□□ -0.26
SPTA1P02549 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
SPTA1P02549 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.43□□□□□ -0.26
SPTA1P02549 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SPTA1P02549 AL139339.2-201ENST00000608063 657 ntBASIC13.43□□□□□ -0.26
SPTA1P02549 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC13.43□□□□□ -0.26
SPTA1P02549 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
SPTA1P02549 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
SPTA1P02549 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.43□□□□□ -0.26
SPTA1P02549 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.43□□□□□ -0.26
SPTA1P02549 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SPTA1P02549 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SPTA1P02549 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.42□□□□□ -0.26
SPTA1P02549 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SPTA1P02549 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.42□□□□□ -0.26
SPTA1P02549 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.42□□□□□ -0.26
SPTA1P02549 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.42□□□□□ -0.26
SPTA1P02549 AC023906.1-201ENST00000486386 453 ntBASIC13.42□□□□□ -0.26
SPTA1P02549 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC13.42□□□□□ -0.26
SPTA1P02549 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 MIR3188-201ENST00000583494 85 ntBASIC13.42□□□□□ -0.26
SPTA1P02549 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.42□□□□□ -0.26
SPTA1P02549 AC069224.1-201ENST00000566372 1715 ntBASIC13.42□□□□□ -0.26
SPTA1P02549 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.42□□□□□ -0.26
SPTA1P02549 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.42□□□□□ -0.26
SPTA1P02549 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.42□□□□□ -0.26
SPTA1P02549 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 AC006058.4-201ENST00000624016 1670 ntBASIC13.42□□□□□ -0.26
SPTA1P02549 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.42□□□□□ -0.26
SPTA1P02549 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SPTA1P02549 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.42□□□□□ -0.26
SPTA1P02549 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
SPTA1P02549 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC13.42□□□□□ -0.26
SPTA1P02549 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.42□□□□□ -0.26
SPTA1P02549 AL135901.1-201ENST00000451812 333 ntBASIC13.42□□□□□ -0.26
SPTA1P02549 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.42□□□□□ -0.26
SPTA1P02549 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC13.42□□□□□ -0.26
SPTA1P02549 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC13.42□□□□□ -0.26
SPTA1P02549 SIGLEC18P-201ENST00000602271 909 ntBASIC13.42□□□□□ -0.26
SPTA1P02549 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
SPTA1P02549 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.42□□□□□ -0.26
SPTA1P02549 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 AL109809.1-201ENST00000418979 1367 ntBASIC13.42□□□□□ -0.26
SPTA1P02549 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
SPTA1P02549 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPTA1P02549 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SPTA1P02549 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SPTA1P02549 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SPTA1P02549 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms