Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.96■□□□□ 0.31
ATP2A1O14983 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A1O14983 AL133499.1-201ENST00000596207 608 ntBASIC16.96■□□□□ 0.31
ATP2A1O14983 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A1O14983 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A1O14983 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A1O14983 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A1O14983 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
ATP2A1O14983 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A1O14983 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
ATP2A1O14983 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.96■□□□□ 0.31
ATP2A1O14983 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ATP2A1O14983 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP2A1O14983 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP2A1O14983 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP2A1O14983 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ATP2A1O14983 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP2A1O14983 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP2A1O14983 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP2A1O14983 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP2A1O14983 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.96■□□□□ 0.3
ATP2A1O14983 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
ATP2A1O14983 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP2A1O14983 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
ATP2A1O14983 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
ATP2A1O14983 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ATP2A1O14983 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
ATP2A1O14983 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.95■□□□□ 0.3
ATP2A1O14983 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 LINC01101-201ENST00000622953 1884 ntBASIC16.95■□□□□ 0.3
ATP2A1O14983 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ATP2A1O14983 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP2A1O14983 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ATP2A1O14983 AC239868.1-201ENST00000369385 493 ntBASIC16.95■□□□□ 0.3
ATP2A1O14983 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 HINT2P1-201ENST00000419438 481 ntBASIC16.95■□□□□ 0.3
ATP2A1O14983 TMEM198B-204ENST00000484016 896 ntBASIC16.95■□□□□ 0.3
ATP2A1O14983 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.95■□□□□ 0.3
ATP2A1O14983 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.95■□□□□ 0.3
ATP2A1O14983 MIR4754-201ENST00000582477 89 ntBASIC16.95■□□□□ 0.3
ATP2A1O14983 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.95■□□□□ 0.3
ATP2A1O14983 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.95■□□□□ 0.3
ATP2A1O14983 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP2A1O14983 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP2A1O14983 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.95■□□□□ 0.3
ATP2A1O14983 PCDHA3-202ENST00000532566 4594 ntBASIC16.95■□□□□ 0.3
ATP2A1O14983 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.95■□□□□ 0.3
ATP2A1O14983 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP2A1O14983 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP2A1O14983 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP2A1O14983 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP2A1O14983 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A1O14983 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A1O14983 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A1O14983 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A1O14983 CYP4F23P-201ENST00000593402 1579 ntBASIC16.94■□□□□ 0.3
ATP2A1O14983 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP2A1O14983 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATP2A1O14983 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ATP2A1O14983 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A1O14983 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A1O14983 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A1O14983 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A1O14983 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A1O14983 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A1O14983 AC091046.1-201ENST00000331871 207 ntBASIC16.94■□□□□ 0.3
ATP2A1O14983 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP2A1O14983 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP2A1O14983 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP2A1O14983 AC234782.1-201ENST00000451950 919 ntBASIC16.94■□□□□ 0.3
ATP2A1O14983 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.94■□□□□ 0.3
ATP2A1O14983 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP2A1O14983 AC090857.1-201ENST00000527400 390 ntBASIC16.94■□□□□ 0.3
ATP2A1O14983 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.94■□□□□ 0.3
ATP2A1O14983 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP2A1O14983 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.94■□□□□ 0.3
ATP2A1O14983 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.94■□□□□ 0.3
ATP2A1O14983 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.94■□□□□ 0.3
ATP2A1O14983 AC006453.1-201ENST00000636037 1257 ntBASIC16.94■□□□□ 0.3
ATP2A1O14983 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A1O14983 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A1O14983 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP2A1O14983 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms