Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 RN7SL530P-201ENST00000485097 298 ntBASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 MIR3180-2-201ENST00000581748 88 ntBASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.37■□□□□ 0.05
HCFC2Q9Y5Z7 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 KRT8P28-201ENST00000433288 1390 ntBASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 AC090502.4-201ENST00000551714 1386 ntBASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 AL590440.2-201ENST00000641973 1595 ntBASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 AC141586.1-203ENST00000567242 366 ntBASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 AC126365.1-201ENST00000578585 1514 ntBASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 MRPL37P1-201ENST00000592451 1337 ntBASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 WASH3P-207ENST00000560956 1394 ntBASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC2Q9Y5Z7 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 MIR1227-201ENST00000408484 88 ntBASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HCFC2Q9Y5Z7 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms