Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.78□□□□□ -0.2
RPH3AQ9Y2J0 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPH3AQ9Y2J0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPH3AQ9Y2J0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RPH3AQ9Y2J0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPH3AQ9Y2J0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPH3AQ9Y2J0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.78□□□□□ -0.2
RPH3AQ9Y2J0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPH3AQ9Y2J0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RPH3AQ9Y2J0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPH3AQ9Y2J0 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
RPH3AQ9Y2J0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.78□□□□□ -0.2
RPH3AQ9Y2J0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.78□□□□□ -0.2
RPH3AQ9Y2J0 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.78□□□□□ -0.2
RPH3AQ9Y2J0 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPH3AQ9Y2J0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RPH3AQ9Y2J0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
RPH3AQ9Y2J0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
RPH3AQ9Y2J0 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.77□□□□□ -0.2
RPH3AQ9Y2J0 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RPH3AQ9Y2J0 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RPH3AQ9Y2J0 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 MIR1908-201ENST00000410394 80 ntBASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 RN7SL219P-201ENST00000582872 296 ntBASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RPH3AQ9Y2J0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 AC020907.1-201ENST00000616460 1350 ntBASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 ANKRD19P-201ENST00000338192 862 ntBASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.76□□□□□ -0.21
RPH3AQ9Y2J0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms