Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 AC007969.1-201ENST00000433675 447 ntBASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 EIF3FP3-201ENST00000434851 1086 ntBASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 TPT1P11-201ENST00000458482 498 ntBASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 AC026434.2-201ENST00000506094 1078 ntBASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
VPS9D1Q9Y2B5 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 MTND2P15-201ENST00000418575 892 ntBASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 BTG3P1-201ENST00000435859 716 ntBASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 AP001830.1-201ENST00000528717 692 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 PTP4A1P2-201ENST00000546033 454 ntBASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS9D1Q9Y2B5 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms