Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 AC067931.2-201ENST00000623655 2003 ntBASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 LINC00265-2P-201ENST00000413372 782 ntBASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 AC026410.1-201ENST00000507366 1101 ntBASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 PLS3-210ENST00000626746 216 ntTSL 4 BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 AC104640.1-201ENST00000562617 2109 ntBASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SHANK2Q9UPX8 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC21.52■■□□□ 1.03
SHANK2Q9UPX8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SHANK2Q9UPX8 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC21.52■■□□□ 1.03
SHANK2Q9UPX8 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SHANK2Q9UPX8 AC012158.2-201ENST00000536546 354 ntBASIC21.52■■□□□ 1.03
SHANK2Q9UPX8 MAX-218ENST00000557746 571 ntTSL 4 BASIC21.52■■□□□ 1.03
SHANK2Q9UPX8 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC21.52■■□□□ 1.03
SHANK2Q9UPX8 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC21.52■■□□□ 1.03
SHANK2Q9UPX8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 DPY19L2P5-201ENST00000456300 331 ntBASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 AC095040.1-201ENST00000513286 675 ntBASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 RNA5SP417-201ENST00000516459 108 ntBASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 SKA2-205ENST00000580541 689 ntTSL 3 BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 AC140113.1-201ENST00000603467 169 ntBASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 ETV2-207ENST00000619399 994 ntTSL 5 BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 AC138466.5-201ENST00000624002 808 ntBASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
SHANK2Q9UPX8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms