Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
COPS3Q9UNS2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.37□□□□□ -0.27
COPS3Q9UNS2 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.37□□□□□ -0.27
COPS3Q9UNS2 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
COPS3Q9UNS2 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COPS3Q9UNS2 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
COPS3Q9UNS2 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COPS3Q9UNS2 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COPS3Q9UNS2 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
COPS3Q9UNS2 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COPS3Q9UNS2 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 AGGF1P1-201ENST00000509500 2073 ntBASIC13.36□□□□□ -0.27
COPS3Q9UNS2 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 AC009477.1-201ENST00000452936 217 ntBASIC13.36□□□□□ -0.27
COPS3Q9UNS2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 AC009407.1-201ENST00000568958 598 ntBASIC13.36□□□□□ -0.27
COPS3Q9UNS2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 AL158211.3-201ENST00000607385 239 ntBASIC13.36□□□□□ -0.27
COPS3Q9UNS2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 AC011474.4-201ENST00000623523 2076 ntBASIC13.36□□□□□ -0.27
COPS3Q9UNS2 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COPS3Q9UNS2 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 AL138799.1-201ENST00000448213 1675 ntBASIC13.35□□□□□ -0.27
COPS3Q9UNS2 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 AC005562.1-201ENST00000583030 3219 ntBASIC13.35□□□□□ -0.27
COPS3Q9UNS2 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.35□□□□□ -0.27
COPS3Q9UNS2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms