Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 AL133338.1-201ENST00000565695 1517 ntBASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 GOLGA8VP-201ENST00000559009 1798 ntBASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 AL008707.1-201ENST00000422498 534 ntBASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 CALR4P-201ENST00000431943 946 ntBASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 AC092580.1-201ENST00000433998 658 ntBASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 AC092299.1-201ENST00000632679 757 ntBASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 AC152010.1-201ENST00000415779 2006 ntBASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 RN7SKP214-201ENST00000364208 315 ntBASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 SLC16A6P1-201ENST00000413214 1059 ntBASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 HIST2H2BC-201ENST00000498492 580 ntBASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 MIR3188-201ENST00000583494 85 ntBASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 AC021016.3-201ENST00000608367 477 ntBASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC19.69■□□□□ 0.74
NPC1L1Q9UHC9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC19.68■□□□□ 0.74
NPC1L1Q9UHC9 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms