Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 AC004466.1-201ENST00000599515 1080 ntBASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 AL138725.1-201ENST00000407347 1314 ntBASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS29Q9UBQ0 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 BAATP1-201ENST00000412284 1225 ntBASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 ACTG1P3-201ENST00000431775 1114 ntBASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 AC138761.1-201ENST00000584393 385 ntBASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 AL136172.1-201ENST00000598590 1394 ntBASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS29Q9UBQ0 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 AC245100.3-201ENST00000441281 285 ntBASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 AC012441.1-201ENST00000446669 685 ntBASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 PTP4A1P2-201ENST00000546033 454 ntBASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 AL355385.1-201ENST00000606123 409 ntBASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 AC134312.5-201ENST00000568031 1313 ntBASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 MRPL37P1-201ENST00000592451 1337 ntBASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 ST20-AS1-201ENST00000560255 4223 ntBASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms