Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 AL138725.1-201ENST00000407347 1314 ntBASIC13.69□□□□□ -0.22
LRFN1Q9P244 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 AC023090.2-201ENST00000625182 2110 ntBASIC13.69□□□□□ -0.22
LRFN1Q9P244 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 RN7SKP230-201ENST00000365642 335 ntBASIC13.69□□□□□ -0.22
LRFN1Q9P244 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 EIF4HP1-201ENST00000453115 687 ntBASIC13.69□□□□□ -0.22
LRFN1Q9P244 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 SHC1P1-201ENST00000425230 1745 ntBASIC13.69□□□□□ -0.22
LRFN1Q9P244 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LRFN1Q9P244 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 SALL4P5-201ENST00000419001 1760 ntBASIC13.68□□□□□ -0.22
LRFN1Q9P244 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 AC099063.4-201ENST00000641099 1602 ntBASIC13.68□□□□□ -0.22
LRFN1Q9P244 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 TLE1P1-201ENST00000422965 589 ntBASIC13.68□□□□□ -0.22
LRFN1Q9P244 BX284668.4-201ENST00000453917 508 ntBASIC13.68□□□□□ -0.22
LRFN1Q9P244 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 AC104640.1-201ENST00000562617 2109 ntBASIC13.68□□□□□ -0.22
LRFN1Q9P244 AC100827.2-201ENST00000563214 1194 ntBASIC13.68□□□□□ -0.22
LRFN1Q9P244 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.68□□□□□ -0.22
LRFN1Q9P244 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 AP002414.2-201ENST00000591780 3365 ntBASIC13.68□□□□□ -0.22
LRFN1Q9P244 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.68□□□□□ -0.22
LRFN1Q9P244 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRFN1Q9P244 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms