Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 GIMAP3P-201ENST00000495150 836 ntBASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 AC018529.1-201ENST00000613063 361 ntBASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 AL138828.2-201ENST00000615812 383 ntBASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 RARRES2P9-201ENST00000565168 469 ntBASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 AL132655.2-201ENST00000596276 594 ntBASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.25□□□□□ -0.13
CCM2LQ9NUG4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCM2LQ9NUG4 AC098614.1-201ENST00000368528 745 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms