Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 AC138035.3-201ENST00000622706 2791 ntBASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 PSAT1P2-201ENST00000426107 972 ntBASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 AL109954.1-202ENST00000564051 2148 ntBASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRPM3Q9HCF6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 PRSS3P1-201ENST00000503996 742 ntBASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 AC068831.5-201ENST00000557387 328 ntBASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 COQ4-204ENST00000608951 781 ntTSL 2 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 AMT-256ENST00000638063 1783 ntTSL 5 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 AC004554.1-201ENST00000422830 1468 ntBASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 ENPP7P8-202ENST00000527856 1345 ntBASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 SARS-202ENST00000369923 1882 ntTSL 5 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 AC018442.1-201ENST00000421439 2061 ntBASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 AL354702.1-201ENST00000442006 1960 ntBASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 OR10N1P-201ENST00000392758 869 ntBASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 SLC25A15P3-201ENST00000505530 290 ntBASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRPM3Q9HCF6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 AC138761.6-201ENST00000583997 1423 ntBASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 OR51A9P-201ENST00000422578 911 ntBASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 AC026336.4-201ENST00000624565 1050 ntBASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TRPM3Q9HCF6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRPM3Q9HCF6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRPM3Q9HCF6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.27■□□□□ 0.67
TRPM3Q9HCF6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms