Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 ZNF259P1-201ENST00000407656 1365 ntBASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 SLC6A6P1-201ENST00000413933 1850 ntBASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 AL450487.1-201ENST00000426799 995 ntBASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 TARDBPP1-201ENST00000442013 1203 ntBASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 AL591424.1-201ENST00000442569 1213 ntBASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 TIMM8BP1-201ENST00000452384 211 ntBASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 GATB-205ENST00000508611 605 ntTSL 2 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 AC015910.1-201ENST00000579400 975 ntBASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 ZBTB45P1-201ENST00000452761 1456 ntBASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms