Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 GIMAP3P-201ENST00000495150 836 ntBASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 RNA5SP421-201ENST00000516864 134 ntBASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 AC123567.1-201ENST00000548294 1261 ntBASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 AC009118.2-201ENST00000613275 655 ntBASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 AC005840.4-201ENST00000541242 2494 ntBASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 DFFBP1-201ENST00000433250 979 ntBASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 AC007969.1-201ENST00000433675 447 ntBASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 EIF3FP3-201ENST00000434851 1086 ntBASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 INGX-202ENST00000489074 768 ntBASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LRTM1Q9HBL6 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRTM1Q9HBL6 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRTM1Q9HBL6 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRTM1Q9HBL6 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.36□□□□□ -0.11
LRTM1Q9HBL6 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.36□□□□□ -0.11
LRTM1Q9HBL6 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LRTM1Q9HBL6 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.36□□□□□ -0.11
LRTM1Q9HBL6 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRTM1Q9HBL6 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRTM1Q9HBL6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms