Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 AC145098.2-201ENST00000623593 3026 ntBASIC12.12□□□□□ -0.47
NKX6-2Q9C056 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 CSPG4P11-201ENST00000560634 4910 ntBASIC12.11□□□□□ -0.47
NKX6-2Q9C056 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 AC022447.6-201ENST00000515522 438 ntBASIC12.11□□□□□ -0.47
NKX6-2Q9C056 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 AL450472.2-201ENST00000603663 1156 ntBASIC12.11□□□□□ -0.47
NKX6-2Q9C056 AL009183.1-201ENST00000603760 355 ntBASIC12.11□□□□□ -0.47
NKX6-2Q9C056 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 AL121772.3-201ENST00000610840 674 ntBASIC12.11□□□□□ -0.47
NKX6-2Q9C056 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 AC005593.1-201ENST00000624894 515 ntBASIC12.11□□□□□ -0.47
NKX6-2Q9C056 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 AC099521.2-201ENST00000619354 2036 ntBASIC12.11□□□□□ -0.47
NKX6-2Q9C056 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 FP325330.2-201ENST00000624219 5630 ntBASIC12.11□□□□□ -0.47
NKX6-2Q9C056 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX6-2Q9C056 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX6-2Q9C056 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms