Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 FAM86MP-201ENST00000340703 885 ntBASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 CNN2P10-201ENST00000443067 918 ntBASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 RN7SL713P-201ENST00000582127 302 ntBASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 AC138466.3-201ENST00000619983 221 ntBASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 AC007686.3-201ENST00000619017 3487 ntBASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 CLUHP2-201ENST00000426660 1303 ntBASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 FKBP4P6-201ENST00000457486 1332 ntBASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 MIR1908-201ENST00000410394 80 ntBASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 MESTP3-201ENST00000503460 968 ntBASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 AL391280.1-201ENST00000506969 1062 ntBASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.48□□□□□ -0.41
SSBP3Q9BWW4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms