Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ECHDC3Q96DC8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
ECHDC3Q96DC8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ECHDC3Q96DC8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ECHDC3Q96DC8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
ECHDC3Q96DC8 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ECHDC3Q96DC8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ECHDC3Q96DC8 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ECHDC3Q96DC8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 AL157407.1-201ENST00000435784 904 ntBASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 TUBB8P8-201ENST00000458717 1058 ntBASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 AC100827.2-201ENST00000563214 1194 ntBASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 AL118558.3-201ENST00000607414 1079 ntBASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 AC007663.3-201ENST00000609632 465 ntBASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 Z98259.2-201ENST00000641583 609 ntBASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ECHDC3Q96DC8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 AL645933.1-201ENST00000440087 609 ntBASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 KLF2P1-201ENST00000447438 1042 ntBASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 ZNF767P-206ENST00000513792 565 ntBASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 AC126915.1-201ENST00000522847 1038 ntBASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 BNIP3P13-201ENST00000599968 566 ntBASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.81□□□□□ -0.04
ECHDC3Q96DC8 AL022328.3-201ENST00000607943 679 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms