Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.17□□□□□ -0.62
RNF183Q96D59 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
RNF183Q96D59 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
RNF183Q96D59 AL109954.1-202ENST00000564051 2148 ntBASIC11.17□□□□□ -0.62
RNF183Q96D59 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC11.17□□□□□ -0.62
RNF183Q96D59 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC11.17□□□□□ -0.62
RNF183Q96D59 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
RNF183Q96D59 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.16□□□□□ -0.62
RNF183Q96D59 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.16□□□□□ -0.62
RNF183Q96D59 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 SSR4P1-203ENST00000599569 2260 ntBASIC11.16□□□□□ -0.62
RNF183Q96D59 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.16□□□□□ -0.62
RNF183Q96D59 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
RNF183Q96D59 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
RNF183Q96D59 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
RNF183Q96D59 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
RNF183Q96D59 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
RNF183Q96D59 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
RNF183Q96D59 GUK1-206ENST00000366723 845 ntTSL 5 BASIC11.16□□□□□ -0.62
RNF183Q96D59 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.16□□□□□ -0.62
RNF183Q96D59 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
RNF183Q96D59 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
RNF183Q96D59 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC11.16□□□□□ -0.62
RNF183Q96D59 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.16□□□□□ -0.62
RNF183Q96D59 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC11.16□□□□□ -0.62
RNF183Q96D59 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC11.16□□□□□ -0.62
RNF183Q96D59 FAM21FP-201ENST00000426241 1131 ntBASIC11.16□□□□□ -0.62
RNF183Q96D59 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC11.16□□□□□ -0.62
RNF183Q96D59 CSF2RBP1-201ENST00000447905 391 ntBASIC11.16□□□□□ -0.62
RNF183Q96D59 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC11.16□□□□□ -0.62
RNF183Q96D59 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC11.16□□□□□ -0.62
RNF183Q96D59 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
RNF183Q96D59 RPL8-205ENST00000527914 551 ntTSL 3 BASIC11.16□□□□□ -0.62
RNF183Q96D59 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC11.16□□□□□ -0.62
RNF183Q96D59 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC11.16□□□□□ -0.62
RNF183Q96D59 KRT90P-201ENST00000549264 1064 ntBASIC11.16□□□□□ -0.62
RNF183Q96D59 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.16□□□□□ -0.62
RNF183Q96D59 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC11.16□□□□□ -0.62
RNF183Q96D59 AC025279.2-201ENST00000569730 653 ntBASIC11.16□□□□□ -0.62
RNF183Q96D59 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
RNF183Q96D59 GNRHR2-203ENST00000581100 1187 ntBASIC11.16□□□□□ -0.62
RNF183Q96D59 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC11.16□□□□□ -0.62
RNF183Q96D59 AC145423.3-201ENST00000615987 467 ntBASIC11.16□□□□□ -0.62
RNF183Q96D59 AC132938.4-201ENST00000623835 848 ntBASIC11.16□□□□□ -0.62
RNF183Q96D59 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC11.16□□□□□ -0.62
RNF183Q96D59 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.16□□□□□ -0.62
RNF183Q96D59 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
RNF183Q96D59 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.16□□□□□ -0.62
RNF183Q96D59 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC11.16□□□□□ -0.62
RNF183Q96D59 TPO-203ENST00000346956 2923 ntTSL 5 BASIC11.16□□□□□ -0.62
RNF183Q96D59 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
RNF183Q96D59 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.16□□□□□ -0.62
RNF183Q96D59 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
RNF183Q96D59 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
RNF183Q96D59 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC11.16□□□□□ -0.62
RNF183Q96D59 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RNF183Q96D59 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
RNF183Q96D59 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.15□□□□□ -0.62
RNF183Q96D59 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms