Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 AL139094.1-201ENST00000405549 1188 ntBASIC16.86■□□□□ 0.29
SMARCE1Q969G3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 RRP7BP-205ENST00000566851 833 ntBASIC16.86■□□□□ 0.29
SMARCE1Q969G3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 AC139530.3-201ENST00000620344 690 ntBASIC16.86■□□□□ 0.29
SMARCE1Q969G3 AC007431.3-201ENST00000623221 587 ntBASIC16.86■□□□□ 0.29
SMARCE1Q969G3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 AL928921.2-201ENST00000641325 2442 ntBASIC16.86■□□□□ 0.29
SMARCE1Q969G3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 INTS4P2-202ENST00000614726 2019 ntBASIC16.86■□□□□ 0.29
SMARCE1Q969G3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCE1Q969G3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 AGGF1P1-201ENST00000509500 2073 ntBASIC16.85■□□□□ 0.29
SMARCE1Q969G3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 BASP1P1-201ENST00000430708 665 ntBASIC16.85■□□□□ 0.29
SMARCE1Q969G3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 DUX4L47-201ENST00000566374 394 ntBASIC16.85■□□□□ 0.29
SMARCE1Q969G3 AC120045.2-201ENST00000567334 178 ntBASIC16.85■□□□□ 0.29
SMARCE1Q969G3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 AC106028.4-201ENST00000614509 607 ntBASIC16.85■□□□□ 0.29
SMARCE1Q969G3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SMARCE1Q969G3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.84■□□□□ 0.29
SMARCE1Q969G3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms