Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 AL139099.5-201ENST00000635274 300 ntBASIC15.99■□□□□ 0.15
BEST2Q8NFU1 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 E2F3P2-201ENST00000447755 1422 ntBASIC15.99■□□□□ 0.15
BEST2Q8NFU1 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 AC018735.1-201ENST00000437208 1502 ntBASIC15.99■□□□□ 0.15
BEST2Q8NFU1 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 AP001258.2-201ENST00000529891 490 ntBASIC15.98■□□□□ 0.15
BEST2Q8NFU1 AC005730.2-201ENST00000564549 1184 ntBASIC15.98■□□□□ 0.15
BEST2Q8NFU1 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 AC009955.4-201ENST00000597192 544 ntBASIC15.98■□□□□ 0.15
BEST2Q8NFU1 AL023803.2-201ENST00000620080 638 ntBASIC15.98■□□□□ 0.15
BEST2Q8NFU1 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.98■□□□□ 0.15
BEST2Q8NFU1 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 AL035414.1-201ENST00000451327 857 ntBASIC15.97■□□□□ 0.15
BEST2Q8NFU1 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.97■□□□□ 0.15
BEST2Q8NFU1 AC126915.1-201ENST00000522847 1038 ntBASIC15.97■□□□□ 0.15
BEST2Q8NFU1 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 AC027601.3-201ENST00000622907 509 ntBASIC15.97■□□□□ 0.15
BEST2Q8NFU1 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 KRT8P29-201ENST00000420409 1371 ntBASIC15.97■□□□□ 0.15
BEST2Q8NFU1 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST2Q8NFU1 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms