Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 BX539320.1-201ENST00000623759 877 ntBASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 MIR600HG-201ENST00000449175 5984 ntBASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC33Q8N5R6 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC33Q8N5R6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC33Q8N5R6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC33Q8N5R6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC33Q8N5R6 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CCDC33Q8N5R6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC33Q8N5R6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC33Q8N5R6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC33Q8N5R6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.71■□□□□ 0.1
CCDC33Q8N5R6 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.71■□□□□ 0.1
CCDC33Q8N5R6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 AL360270.3-201ENST00000609118 1348 ntBASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 AC006001.1-201ENST00000325130 474 ntBASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 MIR1202-201ENST00000408529 83 ntBASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 HLA-K-203ENST00000430151 1046 ntBASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 GOLGA2P4-201ENST00000441462 777 ntBASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 FAM86HP-204ENST00000513466 959 ntBASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 LILRP1-201ENST00000444199 1370 ntBASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CCDC33Q8N5R6 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 AC104306.2-201ENST00000451877 341 ntBASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms